Uses of Class
org.biojava.nbio.structure.contact.AtomContact

Packages that use AtomContact

Package	Description
org.biojava.nbio.structure.contact

Uses of AtomContact in org.biojava.nbio.structure.contact

Methods in org.biojava.nbio.structure.contact that return AtomContact

Modifier and Type	Method	Description
AtomContact	AtomContactSet.getContact(Atom atom1, Atom atom2)	Returns the contact between the 2 given atoms in the given order, or null if there is no such contact in this set.

Methods in org.biojava.nbio.structure.contact that return types with arguments of type AtomContact

Modifier and Type	Method	Description
List<AtomContact>	GroupContact.getAtomContacts()
List<AtomContact>	AtomContactSet.getContactsWithinDistance(double distance)	Returns the list of contacts from this set that are within the given distance.
List<AtomContact>	GroupContact.getContactsWithinDistance(double distance)	Returns the list of atom contacts in this GroupContact that are within the given distance.
Iterator<AtomContact>	AtomContactSet.iterator()

Methods in org.biojava.nbio.structure.contact with parameters of type AtomContact

Modifier and Type	Method	Description
void	AtomContactSet.add(AtomContact contact)	Adds the given contact to this set, keyed by the ordered pair of its 2 atoms.
void	GroupContact.addAtomContact(AtomContact atomContact)

Method parameters in org.biojava.nbio.structure.contact with type arguments of type AtomContact

Modifier and Type	Method	Description
void	AtomContactSet.addAll(Collection<AtomContact> list)	Adds all given contacts to this set, see AtomContactSet.add(AtomContact).